mwb_refmet_database

Imports the Metabolomics Workbench refmet database.

Usage

mwb_refmet_database(bfc = NULL, ...)

Arguments

bfc: (character) BiocFileCache is used to cache database locally and prevent unnecessary downloads. If a path is provided then BiocFileCache will use this location. If NULL it will use the default location (see BiocFileCache() for details). The default is NULL.
...: Additional slots and values passed to struct_class.

Value

A mwb_refmet_database object. This object has no output slots.

Details

This object makes use of functionality from the following packages:

BiocFileCache
httr
plyr

Inheritance

A mwb_refmet_database object inherits the following struct classes:

mwb_refmet_database() ⭢ annotation_database() ⭢ annotation_source() ⭢ struct_class()

References

Shepherd L, Morgan M (2023). BiocFileCache: Manage Files Across Sessions. doi:10.18129/B9.bioc.BiocFileCache https://doi.org/10.18129/B9.bioc.BiocFileCache, R package version 2.10.1, https://bioconductor.org/packages/BiocFileCache.

Wickham H (2023). httr: Tools for Working with URLs and HTTP. R package version 1.4.7, https://CRAN.R-project.org/package=httr.