Preface
Prerequisites
Using this document
1
Introduction
1.1
Why use R?
1.2
struct and structToolbox
1.3
This training course
2
Getting Started
2.1
Installing R and RStudio
2.2
Updating R and RStudio
2.3
Installing required R packages
3
Bioconductor
3.1
What is Bioconductor?
3.2
Installing Bioconductor packages
3.3
Additional packages
4
Workflows, templates and objects
4.1
What is a data processing workflow?
4.2
Templates and Objects
4.3
Working with Templates and Objects
4.4
Exercise
5
DatasetExperiment objects
5.1
The DatasetExperiment template
5.2
Iris DatasetExperiment object
5.3
Exercise
6
Model objects
6.1
The
model
template
6.2
Exercise
7
Chart objects
7.1
The
chart
template
7.2
Modifying charts
7.3
Exercise
8
Model sequences
8.1
The
model_seq
template
8.2
Applying model sequences
8.3
Indexing steps in a sequence
8.4
Exercise
References
Published with bookdown
Introduction to Untargeted Metabolomics Data Analaysis in R using struct and structToolbox packages
References